set_csfmt_rts_data_v1
Package: cstidy 2025.10.27
cstidy: Helpful Functions for Cleaning Surveillance Data
Helpful functions for the cleaning and manipulation of surveillance data, especially with regards to the creation and validation of panel data from individual level surveillance data.
Authors:
cstidy_2025.10.27.tar.gz
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cstidy_2025.10.27.tgz(r-4.6-any)cstidy_2025.10.27.tgz(r-4.5-any)
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cstidy_2025.10.27.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
cstidy/json (API)
| # Install 'cstidy' in R: |
| install.packages('cstidy', repos = c('https://raubreywhite.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/csids/cstidy/issues
Datasets:
- nor_covid19_cases_by_time_location_csfmt_rts_v1 - Covid-19 data for PCR-confirmed cases in Norway
- nor_covid19_icu_and_hospitalization_csfmt_rts_v1 - Norwegian Covid-19 data for ICU and hospitalization
Last updated from:dd6aeb49bd. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 142 | ||
| source / vignettes | OK | 236 | ||
| linux-release-x86_64 | OK | 160 | ||
| macos-release-arm64 | OK | 84 | ||
| macos-oldrel-arm64 | OK | 105 | ||
| windows-devel | OK | 95 | ||
| windows-release | OK | 93 | ||
| windows-oldrel | OK | 92 | ||
| wasm-release | OK | 119 |
Exports:%>%csfmt_rts_data_v1csfmt_rts_data_v2expand_time_togenerate_test_dataheal_time_csfmt_rts_data_v1heal_time_csfmt_rts_data_v2identify_data_structureremove_class_csfmt_rts_dataset_csfmt_rts_data_v1set_csfmt_rts_data_v2unique_time_series
Dependencies:clicpp11crayoncsdatacstimedata.tabledigestfarverggplot2gluegtableisobandlabelinglifecyclemagrittrR6RColorBrewerrlangS7scalesstringistringrvctrsviridisLitewithr
Benchmarks
Last update: 2025-10-27
Started: 2023-05-24
Data format (csfmt_rts_data_v2)
csfmt_rts_data_v2 | Style | Ordering of variables | Time | Approved events | Location | Ages | Sex | Unified columns | Smart assignment | Context-specific columns | Examples | In action | Expand time to | Time series | Summary | Identifying data structure of one column | Reference (Location)
Last update: 2025-10-27
Started: 2025-10-27
Introduction
csfmt_rts_data_v2 | Smart assignment | Summary | Identifying data structure of one column
Last update: 2025-10-27
Started: 2023-05-24
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Expand time to | expand_time_to |
| Generate test data | generate_test_data |
| Provides corresponding healed times (deprecated) | heal_time_csfmt_rts_data_v1 |
| Provides corresponding healed times | heal_time_csfmt_rts_data_v2 |
| Hash the data structure of a dataset for a given column | identify_data_structure identify_data_structure.csfmt_rts_data_v2 identify_data_structure.tbl_Microsoft SQL Server |
| Covid-19 data for PCR-confirmed cases in Norway (nation and county) | nor_covid19_cases_by_time_location_csfmt_rts_v1 |
| Norwegian Covid-19 data for ICU and hospitalization | nor_covid19_icu_and_hospitalization_csfmt_rts_v1 |
| Remove class csfmt_rts_data_* | remove_class_csfmt_rts_data |
| Convert data.table to csfmt_rts_data_v1 (deprecated) | csfmt_rts_data_v1 set_csfmt_rts_data_v1 |
| Convert data.table to csfmt_rts_data_v2 | csfmt_rts_data_v2 set_csfmt_rts_data_v2 |
| Unique time series | unique_time_series |
