Introduction | Data example | Fitting using fit_attrib | County level | National level | Using the sim function | Estimating attributable mortality using est_attrib | Compare the national data to data aggregated from county to national level. | Aggregate from county/weekly to national/seasonal | Aggregating the national model per season | Calculate simulation quantiles. | Plot to compare the national with the aggregated county to national model | Comparing cumulative sums over seasons | Incident rate ratio
Package: attrib 2021.1.2
attrib: Attributable Burden of Disease
Provides functions for estimating the attributable burden of disease due to risk factors. The posterior simulation is performed using arm::sim as described in Gelman, Hill (2012) <doi:10.1017/CBO9780511790942> and the attributable burden method is based on Nielsen, Krause, Molbak <doi:10.1111/irv.12564>.
Authors:
attrib_2021.1.2.tar.gz
attrib_2021.1.2.zip(r-4.7)attrib_2021.1.2.zip(r-4.6)attrib_2021.1.2.zip(r-4.5)
attrib_2021.1.2.tgz(r-4.6-any)attrib_2021.1.2.tgz(r-4.5-any)
attrib_2021.1.2.tar.gz(r-4.7-any)attrib_2021.1.2.tar.gz(r-4.6-any)
attrib_2021.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
attrib/json (API)
| # Install 'attrib' in R: |
| install.packages('attrib', repos = c('https://raubreywhite.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- data_fake_county - Fake data for mortality in Norway
- data_fake_nation - Fake data for mortality in Norway nationally
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:c9be5eadfb. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 168 | ||
| source / vignettes | OK | 203 | ||
| linux-release-x86_64 | NOTE | 158 | ||
| macos-release-arm64 | NOTE | 111 | ||
| macos-oldrel-arm64 | NOTE | 134 | ||
| windows-devel | NOTE | 119 | ||
| windows-release | NOTE | 150 | ||
| windows-oldrel | NOTE | 109 | ||
| wasm-release | OK | 116 |
Exports:est_attribfit_attribsim
Dependencies:abindarmbootclicodacpp11crayondata.tabledlnmfarvergenericsggplot2gluegtablehmsisobandlabelinglatticelifecyclelme4lubridatemagrittrMASSMatrixmgcvminqamixmetamvmetanlmenloptrpbspillarpkgconfigprettyunitsprogressR6rbibutilsRColorBrewerRcppRcppEigenRdpackreformulasrlangS7scalesstringistringrtibbletimechangetsModelutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fake data for mortality in Norway | data_fake_county |
| Fake data for mortality in Norway nationally | data_fake_nation |
| Estimates simulations of expected responses | est_attrib |
| Data fit | fit_attrib |
| Generates simulations of expected mortality by simulating the model coefficients. | sim |
